Dr Simon Cauchemez

Publications


Journals

  • Nouvellet P; Donnelly CA; De Nardi M; Rhodes CJ; De Benedictis P; Citterio C; Obber F; Lorenzetto M; et alPozza MD; Cauchemez S; Cattoli G. (2013). Rabies and canine distemper virus epidemics in the red fox population of northern Italy (2006-2010). PLoS One. 8:e61588. Author weblink DOI.
  • Cauchemez S; Epperson S; Biggerstaff M; Swerdlow D; Finelli L; Ferguson NM. (Mar 2013). Using routine surveillance data to estimate the epidemic potential of emerging zoonoses: application to the emergence of US swine origin influenza A H3N2v virus. PLoS Med. 10:e1001399. Author weblink DOI.
  • Cauchemez S; Horby P; Fox A; Mai LEQ; Thanh LET; Thai PQ; Hoa LENM; Hien NT; et alFerguson NM. (2012). Influenza infection rates, measurement errors and the interpretation of paired serology. PLoS Pathog. 8:e1003061. Author weblink DOI.
  • Lapidus N; de lamballerie X; Salez N; Setbon M; Ferrari P; Delabre RM; Gougeon M-L; Vely F; et alLeruez-Ville M; Andreoletti L; Cauchemez S; Boelle P-Y; Vivier E; Abel L; Schwarzinger M; Legeas M; Le Cann P; Flahault A; Carrat F. (7 Jun 2012). Integrative study of pandemic A/H1N1 influenza infections: design and methods of the CoPanFlu-France cohort. BMC PUBLIC HEALTH. 12. Author weblink DOI.
  • Cremin I; Cauchemez S; Garnett GP; Gregson S. (Aug 2012). Patterns of uptake of HIV testing in sub-Saharan Africa in the pre-treatment era. Trop Med Int Health. 17:e26-e37. Author weblink DOI.
  • Yu H; Cauchemez S; Donnelly CA; Zhou L; Feng L; Xiang N; Zheng J; Ye M; et alHuai Y; Liao Q; Peng Z; Feng Y; Jiang H; Yang W; Wang Y; Ferguson NM; Feng Z. (1 May 2012). Transmission Dynamics, Border Entry Screening, and School Holidays during the 2009 Influenza A (H1N1) Pandemic, China. EMERGING INFECTIOUS DISEASES. 18:758-766. Author weblink DOI.
  • Egan JR; Legrand J; Hall IM; Cauchemez S; Ferguson NM; Leach S. (1 Dec 2010). Re-assessment of mitigation strategies for deliberate releases of anthrax using a real-time outbreak characterization tool. EPIDEMICS. 2:189-194. Author weblink DOI.
  • Walker P; Cauchemez S; Hartemink N; Tiensin T; Ghani AC. (7 Aug 2012). Outbreaks of H5N1 in poultry in Thailand: the relative role of poultry production types in sustaining transmission and the impact of active surveillance in control. J R Soc Interface. 9:1836-1845. Author weblink DOI.
  • Dorigatti I; Cauchemez S; Pugliese A; Ferguson NM. (Mar 2012). A new approach to characterising infectious disease transmission dynamics from sentinel surveillance: application to the Italian 2009-2010 A/H1N1 influenza pandemic. Epidemics. 4:9-21. Author weblink DOI.
  • Killingley B; Enstone JE; Greatorex J; Gilbert AS; Lambkin-Williams R; Cauchemez S; Katz JM; Booy R; et alHayward A; Oxford J; Bridges CB; Ferguson NM; Van-Tam JSN. (1 Jan 2012). Use of a Human Influenza Challenge Model to Assess Person-to-Person Transmission: Proof-of-Concept Study. JOURNAL OF INFECTIOUS DISEASES. 205:35-43. Author weblink DOI.
  • Opatowski L; Fraser C; Griffin J; de Silva E; Van Kerkhove MD; Lyons EJ; Cauchemez S; Ferguson NM. (Sep 2011). Transmission characteristics of the 2009 H1N1 influenza pandemic: comparison of 8 Southern hemisphere countries. PLoS Pathog. 7:e1002225. Author weblink DOI.
  • Cauchemez S; Ferguson NM. (7 Mar 2012). Methods to infer transmission risk factors in complex outbreak data. J R Soc Interface. 9:456-469. Author weblink DOI.
  • Truscott J; Fraser C; Cauchemez S; Meeyai A; Hinsley W; Donnelly CA; Ghani A; Ferguson N. (7 Feb 2012). Essential epidemiological mechanisms underpinning the transmission dynamics of seasonal influenza. J R Soc Interface. 9:304-312. Author weblink DOI.
  • MacIntyre CR; Wang Q; Cauchemez S; Seale H; Dwyer DE; Yang P; Shi W; Gao Z; et alPang X; Zhang Y; Wang X; Duan W; Rahman B; Ferguson N. (May 2011). A cluster randomized clinical trial comparing fit-tested and non-fit-tested N95 respirators to medical masks to prevent respiratory virus infection in health care workers. Influenza Other Respi Viruses. 5:170-179. Author weblink DOI.
  • Cauchemez S; Bhattarai A; Marchbanks TL; Fagan RP; Ostroff S; Ferguson NM; Swerdlow D; Pennsylvania H1N1 working group. (15 Feb 2011). Role of social networks in shaping disease transmission during a community outbreak of 2009 H1N1 pandemic influenza. Proc Natl Acad Sci U S A. 108:2825-2830. Author weblink DOI.
  • Donnelly CA; Finelli L; Cauchemez S; Olsen SJ; Doshi S; Jackson ML; Kennedy ED; Kamimoto L; et alMarchbanks TL; Morgan OW; Patel M; Swerdlow DL; Ferguson NM. (1 Jan 2011). Serial Intervals and the Temporal Distribution of Secondary Infections within Households of 2009 Pandemic Influenza A (H1N1): Implications for Influenza Control Recommendations. CLINICAL INFECTIOUS DISEASES. 52:S123-S130. Author weblink DOI.
  • Marchbanks TL; Bhattarai A; Fagan RP; Ostroff S; Sodha SV; Moll ME; Lee BY; Chang C-CH; et alEnnis B; Britz P; Fiore A; Nguyen M; Palekar R; Archer WR; Gift TL; Leap R; Nygren BL; Cauchemez S; Angulo FJ; Swerdlow D. (1 Jan 2011). An Outbreak of 2009 Pandemic Influenza A (H1N1) Virus Infection in an Elementary School in Pennsylvania. CLINICAL INFECTIOUS DISEASES. 52:S154-S160. Author weblink DOI.
  • Killingley B; Greatorex J; Cauchemez S; Enstone JE; Curran M; Read RC; Lim WS; Hayward A; et alNicholson KG; Nguyen-Van-Tam JS. (1 Oct 2010). Virus shedding and environmental deposition of novel A (H1N1) pandemic influenza virus: interim findings. HEALTH TECHNOLOGY ASSESSMENT. 14:237-+. Author weblink DOI.
  • Eggo RM; Cauchemez S; Ferguson NM. (6 Feb 2011). Spatial dynamics of the 1918 influenza pandemic in England, Wales and the United States. J R Soc Interface. 8:233-243. Author weblink DOI.
  • Walker PG; Cauchemez S; Métras R; Dung DOH; Pfeiffer D; Ghani AC. (Feb 2010). A Bayesian approach to quantifying the effects of mass poultry vaccination upon the spatial and temporal dynamics of H5N1 in Northern Vietnam. PLoS Comput Biol. 6:e1000683. Author weblink DOI Open Access copy.
  • Cauchemez S; Donnelly CA; Reed C; Ghani AC; Fraser C; Kent CK; Finelli L; Ferguson NM. (31 Dec 2009). Household transmission of 2009 pandemic influenza A (H1N1) virus in the United States. N Engl J Med. 361:2619-2627. Author weblink DOI.
  • Fraser C; Donnelly CA; Cauchemez S; Hanage WP; Van Kerkhove MD; Hollingsworth TD; Griffin J; Baggaley RF; et alJenkins HE; Lyons EJ; Jombart T; Hinsley WR; Grassly NC; Balloux F; Ghani AC; Rambaut A; Ferguson NM. (28 Aug 2009). Influenza: Making Privileged Data Public Response. SCIENCE. 325:1072-1073. Author weblink.
  • Evans D; Cauchemez S; Hayden FG. (1 Aug 2009). "Prepandemic" Immunization for Novel Influenza Viruses, "Swine Flu" Vaccine, Guillain-Barre Syndrome, and the Detection of Rare Severe Adverse Events. JOURNAL OF INFECTIOUS DISEASES. 200:321-328. Author weblink DOI.
  • Cauchemez S; Ferguson NM; Watchel C; Tegnell A; Saour G; Duncan B; Nicoll A. (Aug 2009). Closure of schools during an influenza pandemic. Lancet Infectious Disease. 9:473-481.
  • Cremin I; Nyamukapa C; Sherr L; Hallett TB; Chawira G; Cauchemez S; Lopman B; Garnett GP; et alGregson S. (Jun 2010). Patterns of self-reported behaviour change associated with receiving voluntary counselling and testing in a longitudinal study from Manicaland, Zimbabwe. AIDS Behav. 14:708-715. Author weblink DOI Open Access copy.
  • Garske T; Legrand J; Donnelly CA; Ward H; Cauchemez S; Fraser C; Ferguson NM; Ghani AC. (14 Jul 2009). Assessing the severity of the novel influenza A/H1N1 pandemic. BRITISH MEDICAL JOURNAL. 339. Author weblink DOI.
  • Lipsitch M; Riley S; Cauchemez S; Ghani AC; Ferguson NM. (9 Jul 2009). Managing and reducing uncertainty in an emerging influenza pandemic. N Engl J Med. 361:112-115. Author weblink DOI.
  • Fraser C; Donnelly CA; Cauchemez S; Hanage WP; Van Kerkhove MD; Hollingsworth TD; Griffin J; Baggaley RF; et alJenkins HE; Lyons EJ; Jombart T; Hinsley WR; Grassly NC; Balloux F; Ghani AC; Ferguson NM; Rambaut A; Pybus OG; Lopez-Gatell H; Alpuche-Aranda CM; Bojorquez Chapela I; Palacios Zavala E; Espejo Guevara DM; Checchi F; Garcia E; Hugonnet S; Roth C. (19 Jun 2009). Pandemic Potential of a Strain of Influenza A (H1N1): Early Findings. SCIENCE. 324:1557-1561. Author weblink DOI.
  • Maclntyre CR; Cauchemez S; Dwyer DE; Seale H; Cheung P; Browne G; Fasher M; Wood J; et alGao Z; Booy R; Ferguson N. (1 Feb 2009). Face Mask Use and Control of Respiratory Virus Transmission in Households. EMERGING INFECTIOUS DISEASES. 15:233-241. Author weblink DOI.
  • Truscott J; Fraser C; Hinsley W; Cauchemez S; Donnelly C; Ghani A; Ferguson N; Meeyai A. (2009). Quantifying the transmissibility of human influenza and its seasonal variation in temperate regions. PLoS Curr. 1:RRN1125. Author weblink DOI.
  • Ghani A; Baguelin M; Griffin J; Flasche S; van Hoek AJ; Cauchemez S; Donnelly C; Robertson C; et alWhite M; Truscott J; Fraser C; Garske T; White P; Leach S; Hall I; Jenkins H; Ferguson N; Cooper B. (2009). The Early Transmission Dynamics of H1N1pdm Influenza in the United Kingdom. PLoS Curr. 1:RRN1130. Author weblink DOI.
  • Legrand J; Egan JR; Hall IM; Cauchemez S; Leach S; Ferguson NM. (1 Apr 2009). Estimating the Location and Spatial Extent of a Covert Anthrax Release. PLOS COMPUTATIONAL BIOLOGY. 5. Author weblink DOI.
  • Cauchemez S; Ferguson NM. (2007). Likelihood-based estimation of continuous-time epidemic models from time-series data: Application to measles transmission in London. Journal of the Royal Society Interface. DOI.
  • Cauchemez S; Valleron AJ; Boelle PY; Flahault A; Ferguson NM. Estimating the impact of school closure on influenza transmission from sentinel data. Nature. 452:750-754. DOI.
  • Carrat F; Vergu E; Ferguson NM; Lemaitre M; Cauchemez S; Leach S; Valleron A-J. (1 Apr 2008). Time lines of infection and disease in human influenza: A review of volunteer challenge studies. AMERICAN JOURNAL OF EPIDEMIOLOGY. 167:775-785. Author weblink DOI.
  • Cauchemez S; Boëlle PY; Thomas G; Valleron AJ. (15 Sep 2006). Estimating in real time the efficacy of measures to control emerging communicable diseases. Am J Epidemiol. 164:591-597. Author weblink DOI.
  • Cauchemez S; Temime L; Guillemot D; Varon E; Valleron A-J; Thomas G; Boelle P-Y. (1 Sep 2006). Investigating heterogeneity in pneumococcal transmission: A Bayesian-MCMC approach applied to a follow-up of schools. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION. 101:946-958. Author weblink DOI.
  • Carrat F; Lavenu A; Cauchemez S; Deleger S. (1 Feb 2006). Repeated influenza vaccination of healthy children and adults: borrow now, pay later?. EPIDEMIOLOGY AND INFECTION. 134:63-70. Author weblink DOI.
  • Cauchemez S; Temime L; Valleron AJ; Varon E; Thomas G; Guillemot D; Boëlle PY. (2006). S. pneumoniae transmission according to inclusion in conjugate vaccines: Bayesian analysis of a longitudinal follow-up in schools. BMC Infect Dis. 6:14. Author weblink DOI.
  • Cauchemez S; Boelle PY; Donnelly CA; Ferguson NM; Thomas G; Leung GM; Hedley AJ; Anderson RM; et alValleron AJ. (1 Jan 2006). Real-time estimates in early detection of SARS. EMERGING INFECTIOUS DISEASES. 12:110-113. Author weblink.
  • Ferguson NM; Cummings DA; Cauchemez S; Fraser C; Riley S; Meeyai A; Iamsirithaworn S; Burke DS. (8 Sep 2005). Strategies for containing an emerging influenza pandemic in Southeast Asia. Nature. 437:209-214. Author weblink DOI.
  • Cauchemez S; Carrat F; Viboud C; Valleron AJ; Boëlle PY. (30 Nov 2004). A Bayesian MCMC approach to study transmission of influenza: application to household longitudinal data. Stat Med. 23:3469-3487. Author weblink DOI.
  • Cauchemez B; Extramiana F; Cauchemez S; Cosson S; Zouzou H; Meddane M; D'Allonnes LR; Lavergne T; et alLeenhardt A; Coumel P; Houdart E. (1 Mar 2004). High-flow perfusion of sheaths for prevention of thromboembolic complications during complex catheter ablation in the left atrium. JOURNAL OF CARDIOVASCULAR ELECTROPHYSIOLOGY. 15:276-283. Author weblink DOI.

Conferences

  • Lapidus N; de Lamballerie X; Salez N; Moyen N; Ferrari P; Gougeon M-L; Vely F; Leruez-Ville M; et alAndreoletti L; Cauchemez S; Boelle P-Y; Vivier E; Abel L; Schwarzinger M; Setbon M; Legeas M; Le Cann P; Flahault A; Carrat F. Association between pandemic and seasonal influenza vaccination and haemagglutination antibody titers against A/H1N1v: a national representative survey in France, nested in the "Cohorts for Pandemic Influenza'' (CoPanFlu - France). Conference on Options for the Control of Influenza VII, 3 Sep 2010 - 7 Sep 2010. 5:180-183. WILEY-BLACKWELL (1 May 2011). Author weblink.
  • Cauchemez S; Carrat F; Viboud C; Valleron AJ; Boelle PY. Quantifying the role of children in influenza spread: an analysis of household follow-up. 5th International Conference on Options for the Control of Influenza. 1263:288-290. (2004).
  • Viboud C; Boelle PY; Cauchemez S; Lavenu A; Valleron AJ; Flahault A; Carrat F; Kawaoka Y. Risk factors of influenza transmission in households. 5th International Conference on Options for the Control of Influenza, 7 Oct 2003 - 11 Oct 2003. 1263:291-294. ELSEVIER SCIENCE BV (1 Jan 2004). Author weblink DOI.
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